Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.04■□□□□ 0.32
KRT6AP02538 AC063952.2-201ENST00000498792 1227 ntBASIC17.04■□□□□ 0.32
KRT6AP02538 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT6AP02538 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
KRT6AP02538 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT6AP02538 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.04■□□□□ 0.32
KRT6AP02538 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT6AP02538 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
KRT6AP02538 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KRT6AP02538 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
KRT6AP02538 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
KRT6AP02538 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
KRT6AP02538 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 AC016396.2-201ENST00000562575 1417 ntBASIC17.04■□□□□ 0.32
KRT6AP02538 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT6AP02538 AP001094.4-201ENST00000579008 2176 ntBASIC17.04■□□□□ 0.32
KRT6AP02538 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT6AP02538 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
KRT6AP02538 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6AP02538 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
KRT6AP02538 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6AP02538 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6AP02538 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
KRT6AP02538 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT6AP02538 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT6AP02538 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
KRT6AP02538 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6AP02538 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT6AP02538 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6AP02538 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.03■□□□□ 0.32
KRT6AP02538 RNF126P1-202ENST00000569893 925 ntBASIC17.03■□□□□ 0.32
KRT6AP02538 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.03■□□□□ 0.32
KRT6AP02538 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT6AP02538 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.03■□□□□ 0.32
KRT6AP02538 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT6AP02538 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.03■□□□□ 0.32
KRT6AP02538 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KRT6AP02538 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KRT6AP02538 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
KRT6AP02538 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.02■□□□□ 0.32
KRT6AP02538 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6AP02538 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6AP02538 AC097374.2-201ENST00000618617 1306 ntBASIC17.02■□□□□ 0.32
KRT6AP02538 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KRT6AP02538 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
KRT6AP02538 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6AP02538 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6AP02538 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6AP02538 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6AP02538 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6AP02538 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6AP02538 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6AP02538 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6AP02538 AC104076.2-201ENST00000448912 469 ntBASIC17.02■□□□□ 0.32
KRT6AP02538 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6AP02538 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT6AP02538 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6AP02538 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT6AP02538 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KRT6AP02538 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.02■□□□□ 0.32
KRT6AP02538 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
KRT6AP02538 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.02■□□□□ 0.32
KRT6AP02538 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6AP02538 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6AP02538 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6AP02538 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6AP02538 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6AP02538 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.02■□□□□ 0.31
KRT6AP02538 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
KRT6AP02538 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
KRT6AP02538 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
KRT6AP02538 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
KRT6AP02538 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms