Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SNAI3-AS1-205ENST00000568633 2096 ntBASIC7.74□□□□□ -1.17
USH2AO75445 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC7.74□□□□□ -1.17
USH2AO75445 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
USH2AO75445 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
USH2AO75445 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC7.74□□□□□ -1.17
USH2AO75445 INE1-201ENST00000456273 945 ntBASIC7.74□□□□□ -1.17
USH2AO75445 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC7.74□□□□□ -1.17
USH2AO75445 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC7.74□□□□□ -1.17
USH2AO75445 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC7.74□□□□□ -1.17
USH2AO75445 FUT8-AS1-201ENST00000621019 1521 ntBASIC7.74□□□□□ -1.17
USH2AO75445 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
USH2AO75445 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC7.74□□□□□ -1.17
USH2AO75445 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC7.74□□□□□ -1.17
USH2AO75445 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC7.74□□□□□ -1.17
USH2AO75445 HARS-203ENST00000431330 1774 ntTSL 2 BASIC7.74□□□□□ -1.17
USH2AO75445 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
USH2AO75445 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 RASL12-203ENST00000434605 982 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 AC107918.2-201ENST00000530817 355 ntBASIC7.73□□□□□ -1.17
USH2AO75445 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 AC244093.1-201ENST00000610837 814 ntBASIC7.73□□□□□ -1.17
USH2AO75445 GGTLC5P-201ENST00000617623 998 ntBASIC7.73□□□□□ -1.17
USH2AO75445 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC7.73□□□□□ -1.17
USH2AO75445 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
USH2AO75445 FOS-206ENST00000555347 1280 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
USH2AO75445 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC7.73□□□□□ -1.17
USH2AO75445 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
USH2AO75445 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms