Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
TRIM3O75382 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRIM3O75382 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM3O75382 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM3O75382 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRIM3O75382 AL450487.1-201ENST00000426799 995 ntBASIC16.41■□□□□ 0.22
TRIM3O75382 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TRIM3O75382 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM3O75382 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM3O75382 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.41■□□□□ 0.22
TRIM3O75382 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM3O75382 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM3O75382 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM3O75382 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 NSUN5P1-202ENST00000421140 1535 ntBASIC16.4■□□□□ 0.22
TRIM3O75382 NSUN5P2-203ENST00000457352 1529 ntBASIC16.4■□□□□ 0.22
TRIM3O75382 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM3O75382 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM3O75382 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM3O75382 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TRIM3O75382 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.4■□□□□ 0.22
TRIM3O75382 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.4■□□□□ 0.22
TRIM3O75382 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM3O75382 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM3O75382 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM3O75382 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM3O75382 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM3O75382 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM3O75382 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM3O75382 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
TRIM3O75382 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
TRIM3O75382 PKD1P5-201ENST00000532415 10291 ntBASIC16.39■□□□□ 0.21
TRIM3O75382 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM3O75382 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM3O75382 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 REXO1L9P-201ENST00000604264 2108 ntBASIC16.39■□□□□ 0.21
TRIM3O75382 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TRIM3O75382 TSPY19P-201ENST00000418461 509 ntBASIC16.39■□□□□ 0.21
TRIM3O75382 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM3O75382 TSPY18P-201ENST00000441642 509 ntBASIC16.39■□□□□ 0.21
TRIM3O75382 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM3O75382 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM3O75382 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM3O75382 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.39■□□□□ 0.21
TRIM3O75382 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 AC134043.2-201ENST00000624206 2238 ntBASIC16.39■□□□□ 0.21
TRIM3O75382 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRIM3O75382 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM3O75382 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM3O75382 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM3O75382 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM3O75382 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TRIM3O75382 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM3O75382 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
TRIM3O75382 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM3O75382 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM3O75382 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM3O75382 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms