Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CNOT3O75175 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.07■□□□□ 0.32
CNOT3O75175 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNOT3O75175 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.07■□□□□ 0.32
CNOT3O75175 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.07■□□□□ 0.32
CNOT3O75175 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.07■□□□□ 0.32
CNOT3O75175 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.07■□□□□ 0.32
CNOT3O75175 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.07■□□□□ 0.32
CNOT3O75175 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.07■□□□□ 0.32
CNOT3O75175 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.07■□□□□ 0.32
CNOT3O75175 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNOT3O75175 AC091304.2-201ENST00000564639 760 ntBASIC17.07■□□□□ 0.32
CNOT3O75175 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.07■□□□□ 0.32
CNOT3O75175 AL121772.3-201ENST00000610840 674 ntBASIC17.07■□□□□ 0.32
CNOT3O75175 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.07■□□□□ 0.32
CNOT3O75175 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.07■□□□□ 0.32
CNOT3O75175 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.07■□□□□ 0.32
CNOT3O75175 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.07■□□□□ 0.32
CNOT3O75175 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CNOT3O75175 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.07■□□□□ 0.32
CNOT3O75175 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CNOT3O75175 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.07■□□□□ 0.32
CNOT3O75175 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT3O75175 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNOT3O75175 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNOT3O75175 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 AC004870.1-201ENST00000315132 882 ntBASIC17.06■□□□□ 0.32
CNOT3O75175 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CNOT3O75175 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.06■□□□□ 0.32
CNOT3O75175 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT3O75175 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNOT3O75175 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT3O75175 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT3O75175 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT3O75175 AL162727.3-201ENST00000635661 2787 ntBASIC17.06■□□□□ 0.32
CNOT3O75175 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNOT3O75175 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CNOT3O75175 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNOT3O75175 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNOT3O75175 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT3O75175 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT3O75175 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.05■□□□□ 0.32
CNOT3O75175 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNOT3O75175 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT3O75175 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.05■□□□□ 0.32
CNOT3O75175 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT3O75175 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT3O75175 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms