Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.79■□□□□ 0.44
KDELR3O43731 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.79■□□□□ 0.44
KDELR3O43731 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.79■□□□□ 0.44
KDELR3O43731 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.79■□□□□ 0.44
KDELR3O43731 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.79■□□□□ 0.44
KDELR3O43731 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.79■□□□□ 0.44
KDELR3O43731 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.79■□□□□ 0.44
KDELR3O43731 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KDELR3O43731 AL138688.1-201ENST00000624851 1594 ntBASIC17.79■□□□□ 0.44
KDELR3O43731 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
KDELR3O43731 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.78■□□□□ 0.44
KDELR3O43731 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
KDELR3O43731 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.78■□□□□ 0.44
KDELR3O43731 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KDELR3O43731 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.78■□□□□ 0.44
KDELR3O43731 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.78■□□□□ 0.44
KDELR3O43731 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KDELR3O43731 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
KDELR3O43731 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
KDELR3O43731 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDELR3O43731 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KDELR3O43731 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDELR3O43731 KRT18P67-201ENST00000432816 1264 ntBASIC17.78■□□□□ 0.44
KDELR3O43731 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.78■□□□□ 0.44
KDELR3O43731 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.78■□□□□ 0.44
KDELR3O43731 AF186996.4-201ENST00000467186 377 ntBASIC17.78■□□□□ 0.44
KDELR3O43731 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
KDELR3O43731 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.78■□□□□ 0.44
KDELR3O43731 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.78■□□□□ 0.44
KDELR3O43731 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.78■□□□□ 0.44
KDELR3O43731 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.78■□□□□ 0.44
KDELR3O43731 AC064862.7-201ENST00000604520 867 ntBASIC17.78■□□□□ 0.44
KDELR3O43731 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
KDELR3O43731 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
KDELR3O43731 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
KDELR3O43731 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
KDELR3O43731 LINC00896-202ENST00000609602 2128 ntBASIC17.78■□□□□ 0.44
KDELR3O43731 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
KDELR3O43731 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.78■□□□□ 0.44
KDELR3O43731 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.78■□□□□ 0.44
KDELR3O43731 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
KDELR3O43731 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KDELR3O43731 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KDELR3O43731 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
KDELR3O43731 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
KDELR3O43731 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
KDELR3O43731 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
KDELR3O43731 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KDELR3O43731 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KDELR3O43731 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.77■□□□□ 0.44
KDELR3O43731 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KDELR3O43731 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.77■□□□□ 0.44
KDELR3O43731 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KDELR3O43731 AC026396.1-201ENST00000419388 421 ntBASIC17.77■□□□□ 0.44
KDELR3O43731 AC009078.2-202ENST00000463353 338 ntBASIC17.77■□□□□ 0.44
KDELR3O43731 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.77■□□□□ 0.44
KDELR3O43731 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
KDELR3O43731 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.77■□□□□ 0.44
KDELR3O43731 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.77■□□□□ 0.44
KDELR3O43731 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
KDELR3O43731 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.77■□□□□ 0.44
KDELR3O43731 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
KDELR3O43731 AC025062.2-201ENST00000605477 670 ntBASIC17.77■□□□□ 0.44
KDELR3O43731 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.77■□□□□ 0.44
KDELR3O43731 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KDELR3O43731 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KDELR3O43731 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
KDELR3O43731 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
KDELR3O43731 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.77■□□□□ 0.43
KDELR3O43731 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
KDELR3O43731 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KDELR3O43731 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
KDELR3O43731 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
KDELR3O43731 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KDELR3O43731 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 MRPL3P1-201ENST00000400109 1033 ntBASIC17.76■□□□□ 0.43
KDELR3O43731 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.76■□□□□ 0.43
KDELR3O43731 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.76■□□□□ 0.43
KDELR3O43731 AC018712.1-201ENST00000455767 687 ntBASIC17.76■□□□□ 0.43
KDELR3O43731 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms