Protein–RNA interactions for Protein: O14994

SYN3, Synapsin-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3O14994 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.48■□□□□ 0.55
SYN3O14994 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.48■□□□□ 0.55
SYN3O14994 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN3O14994 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.48■□□□□ 0.55
SYN3O14994 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN3O14994 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
SYN3O14994 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN3O14994 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYN3O14994 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SYN3O14994 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SYN3O14994 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SYN3O14994 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SYN3O14994 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 AL135999.2-201ENST00000622438 1686 ntBASIC18.47■□□□□ 0.55
SYN3O14994 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.47■□□□□ 0.55
SYN3O14994 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.47■□□□□ 0.55
SYN3O14994 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.47■□□□□ 0.55
SYN3O14994 GPX1P2-201ENST00000429271 606 ntBASIC18.47■□□□□ 0.55
SYN3O14994 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.47■□□□□ 0.55
SYN3O14994 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SYN3O14994 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SYN3O14994 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.47■□□□□ 0.55
SYN3O14994 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SYN3O14994 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
SYN3O14994 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYN3O14994 AL590787.1-201ENST00000568856 1315 ntBASIC18.47■□□□□ 0.55
SYN3O14994 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.47■□□□□ 0.55
SYN3O14994 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.46■□□□□ 0.55
SYN3O14994 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SYN3O14994 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.46■□□□□ 0.55
SYN3O14994 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.46■□□□□ 0.55
SYN3O14994 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.46■□□□□ 0.55
SYN3O14994 LINC00304-203ENST00000565008 1864 ntBASIC18.46■□□□□ 0.55
SYN3O14994 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 AC002310.6-201ENST00000624451 1377 ntBASIC18.46■□□□□ 0.55
SYN3O14994 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.46■□□□□ 0.55
SYN3O14994 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.46■□□□□ 0.55
SYN3O14994 RPSAP43-201ENST00000402237 625 ntBASIC18.46■□□□□ 0.55
SYN3O14994 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.46■□□□□ 0.55
SYN3O14994 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.46■□□□□ 0.55
SYN3O14994 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.46■□□□□ 0.55
SYN3O14994 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.46■□□□□ 0.55
SYN3O14994 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.46■□□□□ 0.55
SYN3O14994 MTDHP5-201ENST00000598980 586 ntBASIC18.46■□□□□ 0.55
SYN3O14994 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 AC006116.8-202ENST00000587620 1550 ntBASIC18.46■□□□□ 0.55
SYN3O14994 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYN3O14994 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SYN3O14994 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
SYN3O14994 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SYN3O14994 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.45■□□□□ 0.54
SYN3O14994 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
SYN3O14994 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYN3O14994 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYN3O14994 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.45■□□□□ 0.54
SYN3O14994 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYN3O14994 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYN3O14994 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYN3O14994 AC023274.1-201ENST00000418278 595 ntBASIC18.45■□□□□ 0.54
SYN3O14994 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.45■□□□□ 0.54
SYN3O14994 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.45■□□□□ 0.54
SYN3O14994 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SYN3O14994 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYN3O14994 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.45■□□□□ 0.54
SYN3O14994 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.45■□□□□ 0.54
SYN3O14994 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.45■□□□□ 0.54
SYN3O14994 MIR3687-2-201ENST00000577708 61 ntBASIC18.45■□□□□ 0.54
SYN3O14994 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.45■□□□□ 0.54
SYN3O14994 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.45■□□□□ 0.54
SYN3O14994 MIR3687-1-201ENST00000614492 61 ntBASIC18.45■□□□□ 0.54
SYN3O14994 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYN3O14994 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.45■□□□□ 0.54
SYN3O14994 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms