Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL21O00585 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.4■□□□□ 0.06
CCL21O00585 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL21O00585 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCL21O00585 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL21O00585 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL21O00585 AC100803.2-201ENST00000562459 1963 ntBASIC15.4■□□□□ 0.06
CCL21O00585 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CCL21O00585 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.4■□□□□ 0.06
CCL21O00585 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCL21O00585 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL21O00585 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CCL21O00585 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL21O00585 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL21O00585 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CCL21O00585 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.39■□□□□ 0.05
CCL21O00585 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL21O00585 BCRP1-201ENST00000444246 691 ntBASIC15.39■□□□□ 0.05
CCL21O00585 AL513480.1-201ENST00000451731 511 ntBASIC15.39■□□□□ 0.05
CCL21O00585 COX20P2-201ENST00000452636 358 ntBASIC15.39■□□□□ 0.05
CCL21O00585 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.39■□□□□ 0.05
CCL21O00585 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL21O00585 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.39■□□□□ 0.05
CCL21O00585 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.39■□□□□ 0.05
CCL21O00585 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.39■□□□□ 0.05
CCL21O00585 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL21O00585 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL21O00585 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL21O00585 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.39■□□□□ 0.05
CCL21O00585 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL21O00585 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL21O00585 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.39■□□□□ 0.05
CCL21O00585 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.39■□□□□ 0.05
CCL21O00585 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.39■□□□□ 0.05
CCL21O00585 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCL21O00585 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCL21O00585 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CCL21O00585 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCL21O00585 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.38■□□□□ 0.05
CCL21O00585 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.38■□□□□ 0.05
CCL21O00585 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.38■□□□□ 0.05
CCL21O00585 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.38■□□□□ 0.05
CCL21O00585 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCL21O00585 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.38■□□□□ 0.05
CCL21O00585 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.38■□□□□ 0.05
CCL21O00585 AC002558.1-201ENST00000488906 803 ntBASIC15.38■□□□□ 0.05
CCL21O00585 HLA-J-203ENST00000494367 1087 ntBASIC15.38■□□□□ 0.05
CCL21O00585 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.38■□□□□ 0.05
CCL21O00585 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.38■□□□□ 0.05
CCL21O00585 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCL21O00585 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms