Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
SOX1O00570 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.51■□□□□ 0.55
SOX1O00570 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.51■□□□□ 0.55
SOX1O00570 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.51■□□□□ 0.55
SOX1O00570 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.51■□□□□ 0.55
SOX1O00570 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.51■□□□□ 0.55
SOX1O00570 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX1O00570 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX1O00570 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
SOX1O00570 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOX1O00570 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SOX1O00570 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SOX1O00570 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.5■□□□□ 0.55
SOX1O00570 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.5■□□□□ 0.55
SOX1O00570 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SOX1O00570 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SOX1O00570 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.5■□□□□ 0.55
SOX1O00570 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.5■□□□□ 0.55
SOX1O00570 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.5■□□□□ 0.55
SOX1O00570 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.5■□□□□ 0.55
SOX1O00570 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SOX1O00570 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 STK25P1-201ENST00000585406 838 ntBASIC18.5■□□□□ 0.55
SOX1O00570 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 AC008738.7-201ENST00000609744 511 ntBASIC18.5■□□□□ 0.55
SOX1O00570 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.5■□□□□ 0.55
SOX1O00570 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.5■□□□□ 0.55
SOX1O00570 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SOX1O00570 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SOX1O00570 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SOX1O00570 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 AL590787.1-201ENST00000568856 1315 ntBASIC18.49■□□□□ 0.55
SOX1O00570 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SOX1O00570 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.49■□□□□ 0.55
SOX1O00570 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SOX1O00570 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.49■□□□□ 0.55
SOX1O00570 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.49■□□□□ 0.55
SOX1O00570 SLC25A6P2-201ENST00000497974 877 ntBASIC18.49■□□□□ 0.55
SOX1O00570 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.49■□□□□ 0.55
SOX1O00570 WASH4P-201ENST00000564273 1246 ntBASIC18.49■□□□□ 0.55
SOX1O00570 AC109462.3-201ENST00000573934 613 ntBASIC18.49■□□□□ 0.55
SOX1O00570 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.49■□□□□ 0.55
SOX1O00570 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.49■□□□□ 0.55
SOX1O00570 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.49■□□□□ 0.55
SOX1O00570 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.49■□□□□ 0.55
SOX1O00570 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.49■□□□□ 0.55
SOX1O00570 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SOX1O00570 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SOX1O00570 AL157384.1-201ENST00000445995 2473 ntBASIC18.49■□□□□ 0.55
SOX1O00570 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SOX1O00570 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.49■□□□□ 0.55
SOX1O00570 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.49■□□□□ 0.55
SOX1O00570 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.49■□□□□ 0.55
SOX1O00570 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SOX1O00570 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX1O00570 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX1O00570 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.48■□□□□ 0.55
SOX1O00570 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX1O00570 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SOX1O00570 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SOX1O00570 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX1O00570 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX1O00570 AC009477.1-201ENST00000452936 217 ntBASIC18.48■□□□□ 0.55
SOX1O00570 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.48■□□□□ 0.55
SOX1O00570 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.48■□□□□ 0.55
SOX1O00570 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.48■□□□□ 0.55
SOX1O00570 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.48■□□□□ 0.55
SOX1O00570 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.48■□□□□ 0.55
SOX1O00570 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms