Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SDCBPO00560 GCSHP2-201ENST00000560971 527 ntBASIC14.97□□□□□ -0.01
SDCBPO00560 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.97□□□□□ -0.01
SDCBPO00560 AC005363.2-201ENST00000618631 242 ntBASIC14.97□□□□□ -0.01
SDCBPO00560 AL138966.2-201ENST00000621997 464 ntBASIC14.97□□□□□ -0.01
SDCBPO00560 AL023973.1-201ENST00000624619 620 ntBASIC14.97□□□□□ -0.01
SDCBPO00560 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.97□□□□□ -0.01
SDCBPO00560 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SDCBPO00560 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SDCBPO00560 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SDCBPO00560 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SDCBPO00560 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SDCBPO00560 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SDCBPO00560 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SDCBPO00560 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SDCBPO00560 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SDCBPO00560 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SDCBPO00560 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SDCBPO00560 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.97□□□□□ -0.01
SDCBPO00560 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SDCBPO00560 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.96□□□□□ -0.01
SDCBPO00560 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
SDCBPO00560 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
SDCBPO00560 PVRIG2P-201ENST00000435460 978 ntBASIC14.96□□□□□ -0.01
SDCBPO00560 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SDCBPO00560 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.96□□□□□ -0.01
SDCBPO00560 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC14.96□□□□□ -0.01
SDCBPO00560 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.96□□□□□ -0.01
SDCBPO00560 AC010203.1-204ENST00000548782 407 ntBASIC14.96□□□□□ -0.01
SDCBPO00560 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.96□□□□□ -0.01
SDCBPO00560 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SDCBPO00560 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
SDCBPO00560 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SDCBPO00560 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SDCBPO00560 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SDCBPO00560 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.96□□□□□ -0.01
SDCBPO00560 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SDCBPO00560 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SDCBPO00560 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SDCBPO00560 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SDCBPO00560 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SDCBPO00560 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.96□□□□□ -0.02
SDCBPO00560 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.96□□□□□ -0.02
SDCBPO00560 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SDCBPO00560 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SDCBPO00560 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SDCBPO00560 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SDCBPO00560 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.95□□□□□ -0.02
SDCBPO00560 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.95□□□□□ -0.02
SDCBPO00560 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
SDCBPO00560 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SDCBPO00560 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SDCBPO00560 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SDCBPO00560 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SDCBPO00560 AC009949.1-201ENST00000623048 1830 ntBASIC14.95□□□□□ -0.02
SDCBPO00560 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SDCBPO00560 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 AL137013.1-201ENST00000432946 1228 ntBASIC14.95□□□□□ -0.02
SDCBPO00560 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.95□□□□□ -0.02
SDCBPO00560 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.95□□□□□ -0.02
SDCBPO00560 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 COX11P1-201ENST00000489116 835 ntBASIC14.95□□□□□ -0.02
SDCBPO00560 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.95□□□□□ -0.02
SDCBPO00560 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.95□□□□□ -0.02
SDCBPO00560 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.95□□□□□ -0.02
SDCBPO00560 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.95□□□□□ -0.02
SDCBPO00560 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.95□□□□□ -0.02
SDCBPO00560 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.95□□□□□ -0.02
SDCBPO00560 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SDCBPO00560 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
SDCBPO00560 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.95□□□□□ -0.02
SDCBPO00560 AL031432.5-201ENST00000641059 760 ntBASIC14.95□□□□□ -0.02
SDCBPO00560 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SDCBPO00560 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.95□□□□□ -0.02
SDCBPO00560 REXO1L11P-201ENST00000620964 1927 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms