Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C4orf47A7E2U8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 INGX-202ENST00000489074 768 ntBASIC17.11■□□□□ 0.33
C4orf47A7E2U8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 AL390955.2-201ENST00000603032 514 ntBASIC17.11■□□□□ 0.33
C4orf47A7E2U8 GGTLC5P-201ENST00000617623 998 ntBASIC17.11■□□□□ 0.33
C4orf47A7E2U8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C4orf47A7E2U8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 DUX4L27-201ENST00000554796 1261 ntBASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C4orf47A7E2U8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.09■□□□□ 0.33
C4orf47A7E2U8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms