Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 FDX1P1-201ENST00000449115 551 ntBASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 SLC25A6P4-201ENST00000586535 553 ntBASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 MTDHP4-201ENST00000600287 670 ntBASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 AC025062.2-201ENST00000605477 670 ntBASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 AC005332.8-201ENST00000622750 2735 ntBASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
YJEFN3A6XGL0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 KRT18P67-201ENST00000432816 1264 ntBASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 HNRNPDP1-201ENST00000439535 754 ntBASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 PRYP5-201ENST00000451909 266 ntBASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 AC018712.1-201ENST00000455767 687 ntBASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 AL022326.1-202ENST00000641533 845 ntBASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
YJEFN3A6XGL0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 SIGLEC30P-201ENST00000455569 941 ntBASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 AC073648.2-201ENST00000510116 352 ntBASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 AC046185.3-201ENST00000623228 1824 ntBASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
YJEFN3A6XGL0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
YJEFN3A6XGL0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
YJEFN3A6XGL0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.27■□□□□ 0.51
YJEFN3A6XGL0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
YJEFN3A6XGL0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.27■□□□□ 0.51
YJEFN3A6XGL0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
YJEFN3A6XGL0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms