Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHGA11Q9Y5H2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 AC097374.2-201ENST00000618617 1306 ntBASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 AC096633.1-201ENST00000422446 749 ntBASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 AC011498.5-201ENST00000592027 486 ntBASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 AL121956.5-201ENST00000625261 221 ntBASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDHGA11Q9Y5H2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 FAM210CP-201ENST00000445714 574 ntBASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 AC090616.6-201ENST00000582640 721 ntBASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 NKILA-202ENST00000614771 2598 ntBASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHGA11Q9Y5H2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 AL031133.1-201ENST00000406807 723 ntBASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 RN7SL606P-201ENST00000472779 293 ntBASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 KRT8P26-201ENST00000534154 1276 ntBASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 AP001094.4-201ENST00000579008 2176 ntBASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDHGA11Q9Y5H2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 AC011676.5-201ENST00000624864 2660 ntBASIC17.05■□□□□ 0.32
PCDHGA11Q9Y5H2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms