Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 AC004832.2-201ENST00000426397 482 ntBASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
PCDHGA9Q9Y5G4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AP001160.2-201ENST00000596071 487 ntBASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AL022326.1-202ENST00000641533 845 ntBASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 AC099398.1-201ENST00000567919 2776 ntBASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PCDHGA9Q9Y5G4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 AC079776.2-201ENST00000641154 1609 ntBASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 AC002347.1-201ENST00000569543 541 ntBASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 AC006557.2-201ENST00000592985 1240 ntBASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 AC073592.4-201ENST00000623827 446 ntBASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.41■□□□□ 0.22
PCDHGA9Q9Y5G4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms