Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 LINC00304-203ENST00000565008 1864 ntBASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 AL031284.1-201ENST00000419297 478 ntBASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PCDHB1Q9Y5F3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 HLA-J-201ENST00000462773 1622 ntBASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PCDHB1Q9Y5F3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 KRT18P67-201ENST00000432816 1264 ntBASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 BNIP3P18-201ENST00000593976 575 ntBASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PCDHB1Q9Y5F3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 AC026471.1-201ENST00000564629 3026 ntBASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 AC092865.5-201ENST00000545435 363 ntBASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 AL591684.3-201ENST00000605187 298 ntBASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDHB1Q9Y5F3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms