Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 MIR3180-1-201ENST00000580374 94 ntBASIC16.6■□□□□ 0.25
RNF6Q9Y252 MIR3180-3-201ENST00000584616 94 ntBASIC16.6■□□□□ 0.25
RNF6Q9Y252 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 AL118508.1-201ENST00000613502 2345 ntBASIC16.6■□□□□ 0.25
RNF6Q9Y252 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
RNF6Q9Y252 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF6Q9Y252 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 KRT8P26-201ENST00000534154 1276 ntBASIC16.59■□□□□ 0.25
RNF6Q9Y252 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 RN7SL510P-201ENST00000581311 263 ntBASIC16.59■□□□□ 0.25
RNF6Q9Y252 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 AC018695.7-201ENST00000624587 2492 ntBASIC16.59■□□□□ 0.25
RNF6Q9Y252 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF6Q9Y252 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF6Q9Y252 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.58■□□□□ 0.25
RNF6Q9Y252 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
RNF6Q9Y252 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF6Q9Y252 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.58■□□□□ 0.25
RNF6Q9Y252 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF6Q9Y252 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 MIR564-202ENST00000385049 94 ntBASIC16.58■□□□□ 0.24
RNF6Q9Y252 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 HLA-F-220ENST00000434407 884 ntBASIC16.58■□□□□ 0.24
RNF6Q9Y252 AP002383.4-201ENST00000442518 975 ntBASIC16.58■□□□□ 0.24
RNF6Q9Y252 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 MIR3917-201ENST00000580971 93 ntBASIC16.58■□□□□ 0.24
RNF6Q9Y252 AL136038.4-201ENST00000603606 1261 ntBASIC16.58■□□□□ 0.24
RNF6Q9Y252 KRT8P50-201ENST00000562022 1438 ntBASIC16.58■□□□□ 0.24
RNF6Q9Y252 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 AL355312.1-201ENST00000407115 2176 ntBASIC16.58■□□□□ 0.24
RNF6Q9Y252 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF6Q9Y252 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms