Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 AL450487.1-201ENST00000426799 995 ntBASIC19.24■□□□□ 0.67
L1RE1Q9UN81 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 AC005336.2-201ENST00000593183 939 ntBASIC19.24■□□□□ 0.67
L1RE1Q9UN81 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
L1RE1Q9UN81 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 FOSL1P1-201ENST00000511041 816 ntBASIC19.23■□□□□ 0.67
L1RE1Q9UN81 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 AC099336.1-202ENST00000602961 463 ntBASIC19.23■□□□□ 0.67
L1RE1Q9UN81 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
L1RE1Q9UN81 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 AC090340.1-201ENST00000620778 4980 ntBASIC19.22■□□□□ 0.67
L1RE1Q9UN81 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 AL121761.2-201ENST00000598007 1648 ntBASIC19.22■□□□□ 0.67
L1RE1Q9UN81 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 AC138894.3-201ENST00000603787 634 ntBASIC19.22■□□□□ 0.67
L1RE1Q9UN81 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.22■□□□□ 0.67
L1RE1Q9UN81 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms