Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
USP25Q9UHP3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USP25Q9UHP3 AL391807.1-203ENST00000604392 2365 ntBASIC20.17■□□□□ 0.82
USP25Q9UHP3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.17■□□□□ 0.82
USP25Q9UHP3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 AL136038.4-201ENST00000603606 1261 ntBASIC20.17■□□□□ 0.82
USP25Q9UHP3 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.17■□□□□ 0.82
USP25Q9UHP3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.17■□□□□ 0.82
USP25Q9UHP3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
USP25Q9UHP3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USP25Q9UHP3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 ATP5G1P1-201ENST00000448724 379 ntBASIC20.16■□□□□ 0.82
USP25Q9UHP3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 AC010203.1-204ENST00000548782 407 ntBASIC20.16■□□□□ 0.82
USP25Q9UHP3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
USP25Q9UHP3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
USP25Q9UHP3 AC008741.2-201ENST00000612792 3115 ntBASIC20.16■□□□□ 0.82
USP25Q9UHP3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 STARP1-201ENST00000397973 869 ntBASIC20.15■□□□□ 0.82
USP25Q9UHP3 HLA-F-220ENST00000434407 884 ntBASIC20.15■□□□□ 0.82
USP25Q9UHP3 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.15■□□□□ 0.82
USP25Q9UHP3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 AC079602.3-201ENST00000623931 403 ntBASIC20.15■□□□□ 0.82
USP25Q9UHP3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
USP25Q9UHP3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
USP25Q9UHP3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms