Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SPHK1Q9NYA1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 AC148477.5-201ENST00000625164 1645 ntBASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 AC021087.4-201ENST00000563761 564 ntBASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 SLC25A6P4-201ENST00000586535 553 ntBASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 LINC01451-201ENST00000623792 534 ntBASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SPHK1Q9NYA1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 KLF4P1-201ENST00000412782 1185 ntBASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 SCARNA2-201ENST00000458748 420 ntBASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 RNPS1P1-201ENST00000507437 918 ntBASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 AL139288.1-201ENST00000623748 933 ntBASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 AC073592.4-201ENST00000623827 446 ntBASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SPHK1Q9NYA1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 KRT18P67-201ENST00000432816 1264 ntBASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.9■□□□□ 0.3
SPHK1Q9NYA1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms