Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SND1-IT1Q9HBX3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 AC096733.2-201ENST00000609937 1394 ntBASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 AC009065.1-201ENST00000564055 1225 ntBASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 LINC01126-201ENST00000623515 1646 ntBASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SND1-IT1Q9HBX3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 AC008741.2-201ENST00000612792 3115 ntBASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 MFAP1P1-201ENST00000442257 1255 ntBASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 SLC25A1P4-201ENST00000567977 778 ntBASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.8□□□□□ -0.52
SND1-IT1Q9HBX3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms