Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 AC016734.2-201ENST00000624325 1377 ntBASIC16.81■□□□□ 0.28
BRF2Q9HAW0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 AC009533.2-201ENST00000543664 586 ntBASIC16.81■□□□□ 0.28
BRF2Q9HAW0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 AC109462.3-201ENST00000573934 613 ntBASIC16.81■□□□□ 0.28
BRF2Q9HAW0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 AC116353.5-201ENST00000638148 1699 ntBASIC16.81■□□□□ 0.28
BRF2Q9HAW0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
BRF2Q9HAW0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 AC111152.3-201ENST00000569699 673 ntBASIC16.8■□□□□ 0.28
BRF2Q9HAW0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.8■□□□□ 0.28
BRF2Q9HAW0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 AL049757.1-201ENST00000616842 1596 ntBASIC16.8■□□□□ 0.28
BRF2Q9HAW0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
BRF2Q9HAW0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 AL121761.2-201ENST00000598007 1648 ntBASIC16.79■□□□□ 0.28
BRF2Q9HAW0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 FZD10-202ENST00000539839 3282 ntBASIC16.79■□□□□ 0.28
BRF2Q9HAW0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 PKD1P1-201ENST00000458669 6805 ntBASIC16.79■□□□□ 0.28
BRF2Q9HAW0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.79■□□□□ 0.28
BRF2Q9HAW0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms