Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 POLD2P1-201ENST00000511220 997 ntBASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 TERC-201ENST00000602385 541 ntBASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
POLR1BQ9H9Y6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 AC132008.2-207ENST00000454517 770 ntBASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
POLR1BQ9H9Y6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 AC243591.1-201ENST00000452967 1364 ntBASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 AC073648.2-201ENST00000510116 352 ntBASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 AC139887.3-201ENST00000568585 713 ntBASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
POLR1BQ9H9Y6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms