Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
SCAF1Q9H7N4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 HIST2H3DP1-201ENST00000401004 416 ntBASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 AC103702.1-201ENST00000548801 2630 ntBASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SCAF1Q9H7N4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 HNRNPDP1-201ENST00000439535 754 ntBASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 KRT18P3-201ENST00000451602 1288 ntBASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SCAF1Q9H7N4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 AL691447.1-201ENST00000419456 387 ntBASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 AC091607.1-201ENST00000490318 1060 ntBASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 AC145285.3-201ENST00000564603 959 ntBASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 GNAS-203ENST00000306120 1878 ntBASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SCAF1Q9H7N4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 AL591424.1-201ENST00000442569 1213 ntBASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SCAF1Q9H7N4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms