Protein–RNA interactions for Protein: Q9H7E2

TDRD3, Tudor domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 651 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3Q9H7E2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.71■□□□□ 0.91
TDRD3Q9H7E2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.71■□□□□ 0.91
TDRD3Q9H7E2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TDRD3Q9H7E2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TDRD3Q9H7E2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TDRD3Q9H7E2 AC092902.6-201ENST00000641783 218 ntBASIC20.71■□□□□ 0.91
TDRD3Q9H7E2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.71■□□□□ 0.91
TDRD3Q9H7E2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TDRD3Q9H7E2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TDRD3Q9H7E2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.7■□□□□ 0.91
TDRD3Q9H7E2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 KRT18P55-202ENST00000578578 1546 ntBASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 AL139400.1-201ENST00000366220 510 ntBASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 AC093028.1-201ENST00000622998 982 ntBASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TDRD3Q9H7E2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 ACTG1P14-201ENST00000446382 1122 ntBASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TDRD3Q9H7E2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 TSEN15P1-201ENST00000423257 515 ntBASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 AP000344.2-201ENST00000512987 629 ntBASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TDRD3Q9H7E2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms