Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 AC009336.1-201ENST00000608941 1553 ntBASIC20.72■□□□□ 0.91
RNF41Q9H4P4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF41Q9H4P4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.71■□□□□ 0.91
RNF41Q9H4P4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
RNF41Q9H4P4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.7■□□□□ 0.91
RNF41Q9H4P4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 AC067852.2-201ENST00000590513 2313 ntBASIC20.7■□□□□ 0.9
RNF41Q9H4P4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 SIGLEC30P-201ENST00000455569 941 ntBASIC20.7■□□□□ 0.9
RNF41Q9H4P4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 AL031008.1-201ENST00000619963 541 ntBASIC20.7■□□□□ 0.9
RNF41Q9H4P4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF41Q9H4P4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 AC079781.3-201ENST00000449110 356 ntBASIC20.69■□□□□ 0.9
RNF41Q9H4P4 PRYP5-201ENST00000451909 266 ntBASIC20.69■□□□□ 0.9
RNF41Q9H4P4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 NKAPP1-205ENST00000585790 367 ntBASIC20.69■□□□□ 0.9
RNF41Q9H4P4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF41Q9H4P4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF41Q9H4P4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RNF41Q9H4P4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF41Q9H4P4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF41Q9H4P4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms