Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AP000949.1-201ENST00000438328 629 ntBASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AC099063.2-201ENST00000446360 662 ntBASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AC079781.3-201ENST00000449110 356 ntBASIC19.67■□□□□ 0.74
RNF39Q9H2S5 FDX1P1-201ENST00000449115 551 ntBASIC19.67■□□□□ 0.74
RNF39Q9H2S5 TVP23BP2-201ENST00000455082 615 ntBASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AC098679.3-203ENST00000514881 919 ntBASIC19.67■□□□□ 0.74
RNF39Q9H2S5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AC016839.1-201ENST00000578162 867 ntBASIC19.67■□□□□ 0.74
RNF39Q9H2S5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AC104692.2-201ENST00000603054 253 ntBASIC19.67■□□□□ 0.74
RNF39Q9H2S5 AC020923.1-201ENST00000624021 917 ntBASIC19.67■□□□□ 0.74
RNF39Q9H2S5 CLEC4C-205ENST00000542353 1314 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.67■□□□□ 0.74
RNF39Q9H2S5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 NUS1P2-201ENST00000417358 873 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC009506.2-201ENST00000420635 840 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 MINOS1P3-201ENST00000457048 203 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC009078.2-202ENST00000463353 338 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 RPL22L1-202ENST00000463836 506 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 VENTXP7-201ENST00000475503 772 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC109464.1-201ENST00000511091 819 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC099518.2-201ENST00000565802 704 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC008687.5-201ENST00000593746 558 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 BNIP3P18-201ENST00000593976 575 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AL031775.1-201ENST00000607014 887 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AP003072.3-201ENST00000623456 594 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 AC073592.7-201ENST00000623659 507 ntBASIC19.66■□□□□ 0.74
RNF39Q9H2S5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF39Q9H2S5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 AIRN-201ENST00000601203 4374 ntBASIC19.65■□□□□ 0.74
RNF39Q9H2S5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 PRELID3BP10-201ENST00000431957 584 ntBASIC19.65■□□□□ 0.74
RNF39Q9H2S5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 FAAHP1-202ENST00000446499 1238 ntBASIC19.65■□□□□ 0.74
RNF39Q9H2S5 KRT16P4-201ENST00000453883 522 ntBASIC19.65■□□□□ 0.74
RNF39Q9H2S5 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 AC008494.2-201ENST00000514544 370 ntBASIC19.65■□□□□ 0.74
RNF39Q9H2S5 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 AC023968.2-201ENST00000560593 1049 ntBASIC19.65■□□□□ 0.74
RNF39Q9H2S5 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF39Q9H2S5 AC005336.2-201ENST00000593183 939 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms