Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NBPF3Q9H094 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NBPF3Q9H094 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NBPF3Q9H094 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NBPF3Q9H094 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NBPF3Q9H094 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NBPF3Q9H094 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.81■□□□□ 0.92
NBPF3Q9H094 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.81■□□□□ 0.92
NBPF3Q9H094 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.81■□□□□ 0.92
NBPF3Q9H094 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NBPF3Q9H094 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NBPF3Q9H094 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.81■□□□□ 0.92
NBPF3Q9H094 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 HMGN1P19-201ENST00000436976 333 ntBASIC20.81■□□□□ 0.92
NBPF3Q9H094 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.81■□□□□ 0.92
NBPF3Q9H094 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.81■□□□□ 0.92
NBPF3Q9H094 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NBPF3Q9H094 AC073592.4-201ENST00000623827 446 ntBASIC20.81■□□□□ 0.92
NBPF3Q9H094 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NBPF3Q9H094 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 RPL13AP23-201ENST00000480739 586 ntBASIC20.8■□□□□ 0.92
NBPF3Q9H094 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 AC008608.2-201ENST00000606089 416 ntBASIC20.8■□□□□ 0.92
NBPF3Q9H094 AC148477.8-201ENST00000624298 468 ntBASIC20.8■□□□□ 0.92
NBPF3Q9H094 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 AC243591.1-201ENST00000452967 1364 ntBASIC20.8■□□□□ 0.92
NBPF3Q9H094 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NBPF3Q9H094 LYSMD4-203ENST00000378904 2122 ntBASIC20.8■□□□□ 0.92
NBPF3Q9H094 AC004817.3-201ENST00000602957 2129 ntBASIC20.8■□□□□ 0.92
NBPF3Q9H094 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.8■□□□□ 0.92
NBPF3Q9H094 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 SPDYE21P-201ENST00000413323 827 ntBASIC20.79■□□□□ 0.92
NBPF3Q9H094 RBM17P3-201ENST00000417687 1192 ntBASIC20.79■□□□□ 0.92
NBPF3Q9H094 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 SART3-203ENST00000546611 1184 ntBASIC20.79■□□□□ 0.92
NBPF3Q9H094 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 MTDHP3-201ENST00000594186 672 ntBASIC20.79■□□□□ 0.92
NBPF3Q9H094 AL691403.2-201ENST00000618460 490 ntBASIC20.79■□□□□ 0.92
NBPF3Q9H094 ZNF259P1-201ENST00000407656 1365 ntBASIC20.79■□□□□ 0.92
NBPF3Q9H094 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NBPF3Q9H094 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NBPF3Q9H094 AC079776.2-201ENST00000641154 1609 ntBASIC20.78■□□□□ 0.92
NBPF3Q9H094 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NBPF3Q9H094 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.78■□□□□ 0.92
NBPF3Q9H094 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms