Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 NOC2LP1-202ENST00000452600 2235 ntBASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 AC100803.2-201ENST00000562459 1963 ntBASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP3Q9BWW4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 NOC2LP2-201ENST00000407594 1944 ntBASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 AP005117.1-201ENST00000584346 1413 ntBASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 AC103564.2-201ENST00000432853 1299 ntBASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 FAM197Y8-203ENST00000450145 560 ntBASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 AF186996.4-201ENST00000467186 377 ntBASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 AC020916.1-201ENST00000587762 1774 ntBASIC14.68□□□□□ -0.06
SSBP3Q9BWW4 AL354751.1-201ENST00000412768 1863 ntBASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 ABALON-201ENST00000629058 1903 ntBASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 COX5BP2-201ENST00000392354 334 ntBASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 DDX43P3-201ENST00000441064 443 ntBASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 AC073648.2-201ENST00000510116 352 ntBASIC14.67□□□□□ -0.06
SSBP3Q9BWW4 TP73-AS1-207ENST00000624167 988 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms