Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 RN7SL837P-201ENST00000463010 287 ntBASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 RNA5SP423-201ENST00000517127 109 ntBASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 WASH4P-201ENST00000564273 1246 ntBASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 AC008494.3-201ENST00000606615 944 ntBASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 AL391825.1-201ENST00000457671 1364 ntBASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
LRFN3Q9BTN0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRFN3Q9BTN0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 GNAQP1-201ENST00000444815 1067 ntBASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 AL590787.1-201ENST00000568856 1315 ntBASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 AL139099.5-201ENST00000635274 300 ntBASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.34■□□□□ 0.37
LRFN3Q9BTN0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.33■□□□□ 0.37
LRFN3Q9BTN0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.33■□□□□ 0.37
LRFN3Q9BTN0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN3Q9BTN0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN3Q9BTN0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRFN3Q9BTN0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms