Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.15■□□□□ 0.5
CDCA3Q99618 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA3Q99618 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDCA3Q99618 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDCA3Q99618 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.15■□□□□ 0.5
CDCA3Q99618 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.15■□□□□ 0.5
CDCA3Q99618 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.15■□□□□ 0.5
CDCA3Q99618 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA3Q99618 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.15■□□□□ 0.5
CDCA3Q99618 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDCA3Q99618 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA3Q99618 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.15■□□□□ 0.5
CDCA3Q99618 AC055876.3-201ENST00000431496 288 ntBASIC18.15■□□□□ 0.5
CDCA3Q99618 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.15■□□□□ 0.5
CDCA3Q99618 AC087163.2-201ENST00000457299 853 ntBASIC18.15■□□□□ 0.5
CDCA3Q99618 SLC25A6P2-201ENST00000497974 877 ntBASIC18.15■□□□□ 0.5
CDCA3Q99618 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA3Q99618 KRT8P48-201ENST00000515599 1220 ntBASIC18.15■□□□□ 0.5
CDCA3Q99618 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA3Q99618 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA3Q99618 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA3Q99618 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 AC138649.4-201ENST00000612222 287 ntBASIC18.15■□□□□ 0.5
CDCA3Q99618 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.15■□□□□ 0.5
CDCA3Q99618 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.15■□□□□ 0.5
CDCA3Q99618 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.15■□□□□ 0.5
CDCA3Q99618 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CDCA3Q99618 AKAP8P1-201ENST00000434743 1349 ntBASIC18.15■□□□□ 0.5
CDCA3Q99618 AC063926.2-201ENST00000623766 1308 ntBASIC18.15■□□□□ 0.5
CDCA3Q99618 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CDCA3Q99618 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.15■□□□□ 0.5
CDCA3Q99618 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDCA3Q99618 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA3Q99618 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.15■□□□□ 0.5
CDCA3Q99618 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDCA3Q99618 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDCA3Q99618 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.14■□□□□ 0.49
CDCA3Q99618 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.14■□□□□ 0.49
CDCA3Q99618 KRT18P32-201ENST00000424695 1287 ntBASIC18.14■□□□□ 0.49
CDCA3Q99618 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.14■□□□□ 0.49
CDCA3Q99618 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.14■□□□□ 0.49
CDCA3Q99618 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.14■□□□□ 0.49
CDCA3Q99618 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.14■□□□□ 0.49
CDCA3Q99618 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
CDCA3Q99618 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.14■□□□□ 0.49
CDCA3Q99618 AC087641.1-201ENST00000557561 1021 ntBASIC18.14■□□□□ 0.49
CDCA3Q99618 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.14■□□□□ 0.49
CDCA3Q99618 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
CDCA3Q99618 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.14■□□□□ 0.49
CDCA3Q99618 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA3Q99618 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.13■□□□□ 0.49
CDCA3Q99618 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
CDCA3Q99618 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA3Q99618 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 TFAMP1-201ENST00000412727 736 ntBASIC18.13■□□□□ 0.49
CDCA3Q99618 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA3Q99618 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.13■□□□□ 0.49
CDCA3Q99618 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.13■□□□□ 0.49
CDCA3Q99618 TERF1P3-201ENST00000505638 1227 ntBASIC18.13■□□□□ 0.49
CDCA3Q99618 AC079140.1-201ENST00000508039 487 ntBASIC18.13■□□□□ 0.49
CDCA3Q99618 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.13■□□□□ 0.49
CDCA3Q99618 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.13■□□□□ 0.49
CDCA3Q99618 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDCA3Q99618 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.13■□□□□ 0.49
CDCA3Q99618 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CDCA3Q99618 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA3Q99618 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA3Q99618 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms