Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CALR3Q96L12 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CALR3Q96L12 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CALR3Q96L12 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.61■□□□□ 0.57
CALR3Q96L12 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.61■□□□□ 0.57
CALR3Q96L12 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.61■□□□□ 0.57
CALR3Q96L12 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.61■□□□□ 0.57
CALR3Q96L12 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.61■□□□□ 0.57
CALR3Q96L12 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CALR3Q96L12 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.61■□□□□ 0.57
CALR3Q96L12 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 AL353692.3-201ENST00000407031 1396 ntBASIC18.61■□□□□ 0.57
CALR3Q96L12 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.61■□□□□ 0.57
CALR3Q96L12 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CALR3Q96L12 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.61■□□□□ 0.57
CALR3Q96L12 AC068472.1-201ENST00000474589 881 ntBASIC18.61■□□□□ 0.57
CALR3Q96L12 AP003733.1-201ENST00000491725 852 ntBASIC18.61■□□□□ 0.57
CALR3Q96L12 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CALR3Q96L12 GPR32P1-201ENST00000601788 811 ntBASIC18.61■□□□□ 0.57
CALR3Q96L12 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.61■□□□□ 0.57
CALR3Q96L12 AL023973.1-201ENST00000624619 620 ntBASIC18.61■□□□□ 0.57
CALR3Q96L12 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CALR3Q96L12 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CALR3Q96L12 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CALR3Q96L12 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CALR3Q96L12 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CALR3Q96L12 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CALR3Q96L12 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.6■□□□□ 0.57
CALR3Q96L12 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.6■□□□□ 0.57
CALR3Q96L12 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CALR3Q96L12 COX5BP2-201ENST00000392354 334 ntBASIC18.6■□□□□ 0.57
CALR3Q96L12 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.6■□□□□ 0.57
CALR3Q96L12 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.6■□□□□ 0.57
CALR3Q96L12 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.6■□□□□ 0.57
CALR3Q96L12 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.6■□□□□ 0.57
CALR3Q96L12 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CALR3Q96L12 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.6■□□□□ 0.57
CALR3Q96L12 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CALR3Q96L12 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.59■□□□□ 0.57
CALR3Q96L12 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.59■□□□□ 0.57
CALR3Q96L12 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.59■□□□□ 0.57
CALR3Q96L12 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CALR3Q96L12 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CALR3Q96L12 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CALR3Q96L12 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.59■□□□□ 0.57
CALR3Q96L12 BX664615.1-201ENST00000443558 458 ntBASIC18.59■□□□□ 0.57
CALR3Q96L12 ATP5G1P1-201ENST00000448724 379 ntBASIC18.59■□□□□ 0.57
CALR3Q96L12 ZNF444P1-201ENST00000559497 298 ntBASIC18.59■□□□□ 0.57
CALR3Q96L12 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.59■□□□□ 0.57
CALR3Q96L12 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CALR3Q96L12 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CALR3Q96L12 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CALR3Q96L12 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms