Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.95■□□□□ 0.62
LRCH3Q96II8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.95■□□□□ 0.62
LRCH3Q96II8 AC026120.1-201ENST00000611536 926 ntBASIC18.95■□□□□ 0.62
LRCH3Q96II8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.95■□□□□ 0.62
LRCH3Q96II8 AL805961.1-202ENST00000641562 540 ntBASIC18.95■□□□□ 0.62
LRCH3Q96II8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH3Q96II8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
LRCH3Q96II8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH3Q96II8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH3Q96II8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.95■□□□□ 0.62
LRCH3Q96II8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH3Q96II8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH3Q96II8 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.95■□□□□ 0.62
LRCH3Q96II8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH3Q96II8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
LRCH3Q96II8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRCH3Q96II8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH3Q96II8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH3Q96II8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 CU639417.3-201ENST00000624240 1404 ntBASIC18.94■□□□□ 0.62
LRCH3Q96II8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH3Q96II8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH3Q96II8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH3Q96II8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH3Q96II8 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH3Q96II8 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 AP001059.3-201ENST00000619053 235 ntBASIC18.94■□□□□ 0.62
LRCH3Q96II8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.94■□□□□ 0.62
LRCH3Q96II8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
LRCH3Q96II8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH3Q96II8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRCH3Q96II8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 AL032819.2-201ENST00000624543 2162 ntBASIC18.93■□□□□ 0.62
LRCH3Q96II8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 IRX1P1-201ENST00000438849 1838 ntBASIC18.93■□□□□ 0.62
LRCH3Q96II8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRCH3Q96II8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LRCH3Q96II8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH3Q96II8 AC148477.5-201ENST00000625164 1645 ntBASIC18.92■□□□□ 0.62
LRCH3Q96II8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH3Q96II8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH3Q96II8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 KRT18P32-201ENST00000424695 1287 ntBASIC18.92■□□□□ 0.62
LRCH3Q96II8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 AC112191.1-201ENST00000523689 701 ntBASIC18.92■□□□□ 0.62
LRCH3Q96II8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH3Q96II8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH3Q96II8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH3Q96II8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH3Q96II8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH3Q96II8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.92■□□□□ 0.62
LRCH3Q96II8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCH3Q96II8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms