Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM44Q96DX7 GPAT2P1-201ENST00000444924 1672 ntBASIC19.91■□□□□ 0.78
TRIM44Q96DX7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 AC100803.2-201ENST00000562459 1963 ntBASIC19.9■□□□□ 0.78
TRIM44Q96DX7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 AC104640.1-201ENST00000562617 2109 ntBASIC19.9■□□□□ 0.78
TRIM44Q96DX7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 POU5F1P3-201ENST00000428824 1078 ntBASIC19.9■□□□□ 0.78
TRIM44Q96DX7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM44Q96DX7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRIM44Q96DX7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TRIM44Q96DX7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TRIM44Q96DX7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
TRIM44Q96DX7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
TRIM44Q96DX7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC19.89■□□□□ 0.78
TRIM44Q96DX7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 CNN2P6-201ENST00000439038 900 ntBASIC19.89■□□□□ 0.77
TRIM44Q96DX7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM44Q96DX7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TRIM44Q96DX7 SDHAP2-201ENST00000455183 2001 ntBASIC19.88■□□□□ 0.77
TRIM44Q96DX7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms