Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.22■□□□□ 0.19
CNOT9Q92600 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNOT9Q92600 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.22■□□□□ 0.19
CNOT9Q92600 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.22■□□□□ 0.19
CNOT9Q92600 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNOT9Q92600 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CNOT9Q92600 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNOT9Q92600 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.21■□□□□ 0.19
CNOT9Q92600 AC097374.2-201ENST00000618617 1306 ntBASIC16.21■□□□□ 0.19
CNOT9Q92600 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.21■□□□□ 0.19
CNOT9Q92600 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.21■□□□□ 0.19
CNOT9Q92600 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 AL023806.1-201ENST00000603994 1649 ntBASIC16.21■□□□□ 0.19
CNOT9Q92600 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.21■□□□□ 0.19
CNOT9Q92600 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.21■□□□□ 0.19
CNOT9Q92600 AC087388.1-201ENST00000571370 1112 ntBASIC16.21■□□□□ 0.19
CNOT9Q92600 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.21■□□□□ 0.19
CNOT9Q92600 AL353801.3-201ENST00000609898 542 ntBASIC16.21■□□□□ 0.19
CNOT9Q92600 AL590326.2-201ENST00000625139 305 ntBASIC16.21■□□□□ 0.19
CNOT9Q92600 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
CNOT9Q92600 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CNOT9Q92600 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CNOT9Q92600 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNOT9Q92600 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.21■□□□□ 0.19
CNOT9Q92600 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.21■□□□□ 0.19
CNOT9Q92600 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNOT9Q92600 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CNOT9Q92600 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CNOT9Q92600 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CNOT9Q92600 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.2■□□□□ 0.18
CNOT9Q92600 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT9Q92600 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT9Q92600 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CNOT9Q92600 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CNOT9Q92600 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
CNOT9Q92600 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CNOT9Q92600 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT9Q92600 AC005104.2-201ENST00000427818 678 ntBASIC16.2■□□□□ 0.18
CNOT9Q92600 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT9Q92600 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CNOT9Q92600 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.2■□□□□ 0.18
CNOT9Q92600 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.2■□□□□ 0.18
CNOT9Q92600 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CNOT9Q92600 AC116407.4-201ENST00000623319 1061 ntBASIC16.2■□□□□ 0.18
CNOT9Q92600 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.2■□□□□ 0.18
CNOT9Q92600 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 AC016734.2-201ENST00000624325 1377 ntBASIC16.2■□□□□ 0.18
CNOT9Q92600 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNOT9Q92600 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CNOT9Q92600 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
CNOT9Q92600 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.19■□□□□ 0.18
CNOT9Q92600 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CNOT9Q92600 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CNOT9Q92600 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNOT9Q92600 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms