Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.62■□□□□ 0.25
TM9SF4Q92544 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TM9SF4Q92544 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 AC068472.1-201ENST00000474589 881 ntBASIC16.61■□□□□ 0.25
TM9SF4Q92544 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 RNPS1P1-201ENST00000507437 918 ntBASIC16.61■□□□□ 0.25
TM9SF4Q92544 KRT18P58-201ENST00000527480 1120 ntBASIC16.61■□□□□ 0.25
TM9SF4Q92544 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 AL355877.3-201ENST00000622820 899 ntBASIC16.61■□□□□ 0.25
TM9SF4Q92544 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 AF228730.7-201ENST00000641842 219 ntBASIC16.61■□□□□ 0.25
TM9SF4Q92544 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.61■□□□□ 0.25
TM9SF4Q92544 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TM9SF4Q92544 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TM9SF4Q92544 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TM9SF4Q92544 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms