Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 FAM220CP-201ENST00000395253 831 ntBASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 TOB2P1-201ENST00000469761 992 ntBASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 VENTXP7-201ENST00000475503 772 ntBASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 AC109462.3-201ENST00000573934 613 ntBASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDH19Q8TAB3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH19Q8TAB3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH19Q8TAB3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH19Q8TAB3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDH19Q8TAB3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.14■□□□□ 0.5
PCDH19Q8TAB3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.14■□□□□ 0.5
PCDH19Q8TAB3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 AC092329.2-201ENST00000598402 547 ntBASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDH19Q8TAB3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 KRT17P6-201ENST00000453795 1220 ntBASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 AC009533.2-201ENST00000543664 586 ntBASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 AC011467.2-201ENST00000598425 242 ntBASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH19Q8TAB3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 IGHV3-47-201ENST00000425060 335 ntBASIC18.12■□□□□ 0.49
PCDH19Q8TAB3 LINC00265-3P-201ENST00000447588 903 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms