Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 AC093677.2-201ENST00000600169 1863 ntBASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 WASH6P-202ENST00000359512 1437 ntBASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 MIR1909-201ENST00000411312 80 ntBASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL22A1Q8NFW1 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 AL135999.2-201ENST00000622438 1686 ntBASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 HMGA1P7-201ENST00000406908 502 ntBASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 LY6E-204ENST00000519546 971 ntTSL 2 BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL22A1Q8NFW1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 AC009477.1-201ENST00000452936 217 ntBASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 SATB1-217ENST00000493952 626 ntTSL 3 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 IGHV3-62-201ENST00000520057 340 ntBASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 AC140912.1-201ENST00000577171 1054 ntBASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 AC126763.1-201ENST00000552015 2118 ntBASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.16■■□□□ 1.3
COL22A1Q8NFW1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 GIMAP3P-201ENST00000495150 836 ntBASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 AC004233.3-201ENST00000607794 1269 ntBASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 AC008267.7-201ENST00000624570 1194 ntBASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL22A1Q8NFW1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.14■■□□□ 1.3
COL22A1Q8NFW1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
COL22A1Q8NFW1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.14■■□□□ 1.3
COL22A1Q8NFW1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.3
COL22A1Q8NFW1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL22A1Q8NFW1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 MIR3909-201ENST00000579518 119 ntBASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL22A1Q8NFW1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms