Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC27.25■■□□□ 1.95
CFAP43Q8NDM7 AC104581.1-202ENST00000635932 2618 ntBASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 AC025678.2-201ENST00000562061 970 ntBASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 MYCLP1-201ENST00000372451 1075 ntBASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 SIGLEC30P-201ENST00000455569 941 ntBASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 AC093520.2-201ENST00000561830 333 ntBASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC27.24■■□□□ 1.95
CFAP43Q8NDM7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 AL627223.1-201ENST00000416693 442 ntBASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 AC087289.5-201ENST00000586076 3175 ntBASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CFAP43Q8NDM7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 AP002414.1-201ENST00000391405 1147 ntBASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 AC074386.1-202ENST00000463561 864 ntBASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CFAP43Q8NDM7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 AC236430.1-201ENST00000402231 743 ntBASIC27.21■■□□□ 1.95
CFAP43Q8NDM7 DDT-204ENST00000404092 805 ntTSL 3 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms