Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 AL022342.1-201ENST00000400363 863 ntBASIC17.96■□□□□ 0.47
KDM1BQ8NB78 AC079776.4-201ENST00000511039 504 ntBASIC17.96■□□□□ 0.47
KDM1BQ8NB78 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 FAM215A-202ENST00000632077 792 ntBASIC17.96■□□□□ 0.47
KDM1BQ8NB78 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KDM1BQ8NB78 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
KDM1BQ8NB78 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.96■□□□□ 0.46
KDM1BQ8NB78 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 AL590627.1-203ENST00000421194 1026 ntBASIC17.95■□□□□ 0.46
KDM1BQ8NB78 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.95■□□□□ 0.46
KDM1BQ8NB78 AL353593.2-201ENST00000602529 1483 ntBASIC17.95■□□□□ 0.46
KDM1BQ8NB78 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 AC139887.3-201ENST00000568585 713 ntBASIC17.94■□□□□ 0.46
KDM1BQ8NB78 NKAPP1-205ENST00000585790 367 ntBASIC17.94■□□□□ 0.46
KDM1BQ8NB78 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 IL9RP2-201ENST00000423948 1312 ntBASIC17.94■□□□□ 0.46
KDM1BQ8NB78 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.94■□□□□ 0.46
KDM1BQ8NB78 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 BX276092.7-203ENST00000637198 1536 ntBASIC17.93■□□□□ 0.46
KDM1BQ8NB78 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 AP000347.1-202ENST00000435868 847 ntBASIC17.93■□□□□ 0.46
KDM1BQ8NB78 HNRNPDP1-201ENST00000439535 754 ntBASIC17.93■□□□□ 0.46
KDM1BQ8NB78 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 AC025062.2-201ENST00000605477 670 ntBASIC17.93■□□□□ 0.46
KDM1BQ8NB78 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.93■□□□□ 0.46
KDM1BQ8NB78 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms