Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 NKILA-202ENST00000614771 2598 ntBASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC83Q8IWF9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 AL645929.1-201ENST00000420084 975 ntBASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 AC011676.5-201ENST00000624864 2660 ntBASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC83Q8IWF9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 AC084018.2-201ENST00000613093 2607 ntBASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC83Q8IWF9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC83Q8IWF9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.64■□□□□ 0.9
CCDC83Q8IWF9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC83Q8IWF9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.64■□□□□ 0.9
CCDC83Q8IWF9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC83Q8IWF9 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC83Q8IWF9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC83Q8IWF9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCDC83Q8IWF9 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.64■□□□□ 0.9
CCDC83Q8IWF9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 AL139327.4-201ENST00000612362 153 ntBASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC83Q8IWF9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCDC83Q8IWF9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms