Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.37■□□□□ 0.85
KRT40Q6A162 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRT40Q6A162 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
KRT40Q6A162 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.36■□□□□ 0.85
KRT40Q6A162 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT40Q6A162 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT40Q6A162 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT40Q6A162 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT40Q6A162 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT40Q6A162 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
KRT40Q6A162 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT40Q6A162 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.36■□□□□ 0.85
KRT40Q6A162 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT40Q6A162 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
KRT40Q6A162 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.36■□□□□ 0.85
KRT40Q6A162 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
KRT40Q6A162 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.36■□□□□ 0.85
KRT40Q6A162 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT40Q6A162 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT40Q6A162 LYSMD4-203ENST00000378904 2122 ntBASIC20.35■□□□□ 0.85
KRT40Q6A162 KRT18P1-202ENST00000452408 1331 ntBASIC20.35■□□□□ 0.85
KRT40Q6A162 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT40Q6A162 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT40Q6A162 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
KRT40Q6A162 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT40Q6A162 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
KRT40Q6A162 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.35■□□□□ 0.85
KRT40Q6A162 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.35■□□□□ 0.85
KRT40Q6A162 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
KRT40Q6A162 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT40Q6A162 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
KRT40Q6A162 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.35■□□□□ 0.85
KRT40Q6A162 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT40Q6A162 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
KRT40Q6A162 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.35■□□□□ 0.85
KRT40Q6A162 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT40Q6A162 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT40Q6A162 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.35■□□□□ 0.85
KRT40Q6A162 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
KRT40Q6A162 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRT40Q6A162 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRT40Q6A162 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KRT40Q6A162 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT40Q6A162 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT40Q6A162 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KRT40Q6A162 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.34■□□□□ 0.85
KRT40Q6A162 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT40Q6A162 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT40Q6A162 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KRT40Q6A162 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
KRT40Q6A162 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
KRT40Q6A162 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 MRPL3P1-201ENST00000400109 1033 ntBASIC20.34■□□□□ 0.85
KRT40Q6A162 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
KRT40Q6A162 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.34■□□□□ 0.85
KRT40Q6A162 TPSP2-201ENST00000561760 610 ntBASIC20.34■□□□□ 0.85
KRT40Q6A162 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
KRT40Q6A162 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 AL023806.1-201ENST00000603994 1649 ntBASIC20.34■□□□□ 0.85
KRT40Q6A162 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT40Q6A162 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
KRT40Q6A162 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT40Q6A162 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.34■□□□□ 0.85
KRT40Q6A162 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
KRT40Q6A162 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.34■□□□□ 0.85
KRT40Q6A162 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms