Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 PI4KAP1-204ENST00000612579 1703 ntBASIC9.47□□□□□ -0.89
UBR4Q5T4S7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 SDHAP3-202ENST00000515467 728 ntBASIC9.47□□□□□ -0.89
UBR4Q5T4S7 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 GOLGA2P11-201ENST00000562660 1621 ntBASIC9.47□□□□□ -0.89
UBR4Q5T4S7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 UPF3AP2-201ENST00000457924 1132 ntBASIC9.47□□□□□ -0.89
UBR4Q5T4S7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
UBR4Q5T4S7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 AC007389.4-201ENST00000454674 793 ntBASIC9.46□□□□□ -0.89
UBR4Q5T4S7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 AL049840.4-201ENST00000602422 811 ntBASIC9.46□□□□□ -0.89
UBR4Q5T4S7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 PDIA3P1-201ENST00000471856 1510 ntBASIC9.46□□□□□ -0.89
UBR4Q5T4S7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 LBX2-AS1-202ENST00000603175 2083 ntBASIC9.46□□□□□ -0.89
UBR4Q5T4S7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 SLC7A15P-201ENST00000424028 1363 ntBASIC9.46□□□□□ -0.89
UBR4Q5T4S7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
UBR4Q5T4S7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 KLF2P4-201ENST00000451959 1225 ntBASIC9.46□□□□□ -0.9
UBR4Q5T4S7 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 FAM86HP-204ENST00000513466 959 ntBASIC9.46□□□□□ -0.9
UBR4Q5T4S7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 HCG18-241ENST00000602290 821 ntTSL 2 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
UBR4Q5T4S7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
UBR4Q5T4S7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms