Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KHDC1Q4VXA5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
KHDC1Q4VXA5 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KHDC1Q4VXA5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KHDC1Q4VXA5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.83■□□□□ 0.44
KHDC1Q4VXA5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 AC068472.1-201ENST00000474589 881 ntBASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 AC009154.2-201ENST00000621177 724 ntBASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 FLJ13224-201ENST00000313737 1514 ntBASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KHDC1Q4VXA5 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 PCDH8P1-201ENST00000428983 2773 ntBASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 KRT18P65-201ENST00000439811 1286 ntBASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 GUSBP12-201ENST00000513727 720 ntBASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 AP005901.3-202ENST00000581653 237 ntBASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.81■□□□□ 0.44
KHDC1Q4VXA5 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 DRAXINP1-201ENST00000437611 948 ntBASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 HCG4P8-203ENST00000443049 980 ntBASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.8■□□□□ 0.44
KHDC1Q4VXA5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms