Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL390719.2-201ENST00000606993 987 ntBASIC20.01■□□□□ 0.79
LONRF3Q496Y0 IGHV3-41-201ENST00000613121 348 ntBASIC20.01■□□□□ 0.79
LONRF3Q496Y0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LONRF3Q496Y0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20■□□□□ 0.79
LONRF3Q496Y0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20■□□□□ 0.79
LONRF3Q496Y0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
LONRF3Q496Y0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20■□□□□ 0.79
LONRF3Q496Y0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20■□□□□ 0.79
LONRF3Q496Y0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20■□□□□ 0.79
LONRF3Q496Y0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20■□□□□ 0.79
LONRF3Q496Y0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 RN7SL510P-201ENST00000581311 263 ntBASIC20■□□□□ 0.79
LONRF3Q496Y0 AL732292.2-201ENST00000609649 430 ntBASIC20■□□□□ 0.79
LONRF3Q496Y0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20■□□□□ 0.79
LONRF3Q496Y0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LONRF3Q496Y0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LONRF3Q496Y0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 AL691432.3-201ENST00000621860 400 ntBASIC19.99■□□□□ 0.79
LONRF3Q496Y0 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LONRF3Q496Y0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 AL353692.3-201ENST00000407031 1396 ntBASIC19.98■□□□□ 0.79
LONRF3Q496Y0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 AC068472.1-201ENST00000474589 881 ntBASIC19.98■□□□□ 0.79
LONRF3Q496Y0 FOSL1P1-201ENST00000511041 816 ntBASIC19.98■□□□□ 0.79
LONRF3Q496Y0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LONRF3Q496Y0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms