Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
SEC61A1P61619 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
SEC61A1P61619 UPK3BP1-201ENST00000428678 509 ntBASIC15.44■□□□□ 0.06
SEC61A1P61619 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.44■□□□□ 0.06
SEC61A1P61619 VENTXP5-201ENST00000523979 775 ntBASIC15.44■□□□□ 0.06
SEC61A1P61619 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.44■□□□□ 0.06
SEC61A1P61619 AC091076.1-201ENST00000610741 619 ntBASIC15.44■□□□□ 0.06
SEC61A1P61619 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SEC61A1P61619 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
SEC61A1P61619 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SEC61A1P61619 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SEC61A1P61619 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.44■□□□□ 0.06
SEC61A1P61619 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SEC61A1P61619 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SEC61A1P61619 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SEC61A1P61619 FLJ13224-201ENST00000313737 1514 ntBASIC15.43■□□□□ 0.06
SEC61A1P61619 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 FER1L4-210ENST00000615531 5998 ntBASIC15.43■□□□□ 0.06
SEC61A1P61619 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.43■□□□□ 0.06
SEC61A1P61619 HBZP1-201ENST00000354915 429 ntBASIC15.43■□□□□ 0.06
SEC61A1P61619 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.43■□□□□ 0.06
SEC61A1P61619 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SEC61A1P61619 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.43■□□□□ 0.06
SEC61A1P61619 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.43■□□□□ 0.06
SEC61A1P61619 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.43■□□□□ 0.06
SEC61A1P61619 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SEC61A1P61619 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.43■□□□□ 0.06
SEC61A1P61619 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.43■□□□□ 0.06
SEC61A1P61619 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.43■□□□□ 0.06
SEC61A1P61619 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.43■□□□□ 0.06
SEC61A1P61619 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.43■□□□□ 0.06
SEC61A1P61619 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.43■□□□□ 0.06
SEC61A1P61619 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.43■□□□□ 0.06
SEC61A1P61619 AC079602.3-201ENST00000623931 403 ntBASIC15.43■□□□□ 0.06
SEC61A1P61619 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.43■□□□□ 0.06
SEC61A1P61619 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.43■□□□□ 0.06
SEC61A1P61619 AP000550.4-202ENST00000639755 178 ntBASIC15.43■□□□□ 0.06
SEC61A1P61619 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SEC61A1P61619 IER3-202ENST00000376377 1350 ntBASIC15.43■□□□□ 0.06
SEC61A1P61619 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.43■□□□□ 0.06
SEC61A1P61619 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.43■□□□□ 0.06
SEC61A1P61619 LINC00602-201ENST00000629776 2065 ntBASIC15.43■□□□□ 0.06
SEC61A1P61619 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.43■□□□□ 0.06
SEC61A1P61619 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SEC61A1P61619 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.43■□□□□ 0.06
SEC61A1P61619 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.43■□□□□ 0.06
SEC61A1P61619 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SEC61A1P61619 AC034236.2-201ENST00000606662 1610 ntBASIC15.43■□□□□ 0.06
SEC61A1P61619 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.42■□□□□ 0.06
SEC61A1P61619 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.42■□□□□ 0.06
SEC61A1P61619 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
SEC61A1P61619 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SEC61A1P61619 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms