Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 AL121894.2-201ENST00000602977 491 ntBASIC19.02■□□□□ 0.64
PDE6CP51160 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.02■□□□□ 0.64
PDE6CP51160 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PDE6CP51160 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDE6CP51160 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDE6CP51160 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDE6CP51160 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDE6CP51160 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDE6CP51160 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PDE6CP51160 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDE6CP51160 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PDE6CP51160 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.02■□□□□ 0.63
PDE6CP51160 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.02■□□□□ 0.63
PDE6CP51160 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
PDE6CP51160 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.01■□□□□ 0.63
PDE6CP51160 TSPY19P-201ENST00000418461 509 ntBASIC19.01■□□□□ 0.63
PDE6CP51160 TSPY18P-201ENST00000441642 509 ntBASIC19.01■□□□□ 0.63
PDE6CP51160 AC091304.2-201ENST00000564639 760 ntBASIC19.01■□□□□ 0.63
PDE6CP51160 AC074051.2-201ENST00000565115 352 ntBASIC19.01■□□□□ 0.63
PDE6CP51160 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.01■□□□□ 0.63
PDE6CP51160 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.01■□□□□ 0.63
PDE6CP51160 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.01■□□□□ 0.63
PDE6CP51160 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDE6CP51160 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.01■□□□□ 0.63
PDE6CP51160 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 HLA-J-201ENST00000462773 1622 ntBASIC19■□□□□ 0.63
PDE6CP51160 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19■□□□□ 0.63
PDE6CP51160 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19■□□□□ 0.63
PDE6CP51160 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDE6CP51160 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
PDE6CP51160 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19■□□□□ 0.63
PDE6CP51160 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19■□□□□ 0.63
PDE6CP51160 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19■□□□□ 0.63
PDE6CP51160 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 KRT17P6-201ENST00000453795 1220 ntBASIC19■□□□□ 0.63
PDE6CP51160 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PDE6CP51160 AC068472.1-201ENST00000474589 881 ntBASIC19■□□□□ 0.63
PDE6CP51160 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19■□□□□ 0.63
PDE6CP51160 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19■□□□□ 0.63
PDE6CP51160 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19■□□□□ 0.63
PDE6CP51160 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
PDE6CP51160 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDE6CP51160 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDE6CP51160 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE6CP51160 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE6CP51160 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE6CP51160 AC026396.1-201ENST00000419388 421 ntBASIC18.99■□□□□ 0.63
PDE6CP51160 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.99■□□□□ 0.63
PDE6CP51160 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDE6CP51160 RN7SL510P-201ENST00000581311 263 ntBASIC18.99■□□□□ 0.63
PDE6CP51160 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms