Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.93□□□□□ -0.18
CDC34P49427 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDC34P49427 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.93□□□□□ -0.18
CDC34P49427 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.93□□□□□ -0.18
CDC34P49427 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
CDC34P49427 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.93□□□□□ -0.18
CDC34P49427 IKBKGP1-201ENST00000612193 1073 ntBASIC13.93□□□□□ -0.18
CDC34P49427 CR392000.1-201ENST00000624770 1228 ntBASIC13.93□□□□□ -0.18
CDC34P49427 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 AC008741.2-201ENST00000612792 3115 ntBASIC13.93□□□□□ -0.18
CDC34P49427 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC34P49427 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.93□□□□□ -0.18
CDC34P49427 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDC34P49427 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDC34P49427 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CDC34P49427 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.93□□□□□ -0.18
CDC34P49427 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDC34P49427 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDC34P49427 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 REXO1L11P-201ENST00000620964 1927 ntBASIC13.92□□□□□ -0.18
CDC34P49427 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDC34P49427 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDC34P49427 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.92□□□□□ -0.18
CDC34P49427 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDC34P49427 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 AL353807.1-201ENST00000427475 662 ntBASIC13.92□□□□□ -0.18
CDC34P49427 AC069152.1-201ENST00000438030 544 ntBASIC13.92□□□□□ -0.18
CDC34P49427 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 AP003097.1-201ENST00000530657 1135 ntBASIC13.92□□□□□ -0.18
CDC34P49427 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.92□□□□□ -0.18
CDC34P49427 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.92□□□□□ -0.18
CDC34P49427 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.92□□□□□ -0.18
CDC34P49427 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 MIR6786-201ENST00000616843 113 ntBASIC13.92□□□□□ -0.18
CDC34P49427 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDC34P49427 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
CDC34P49427 AL596257.1-201ENST00000641463 2694 ntBASIC13.92□□□□□ -0.18
CDC34P49427 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
CDC34P49427 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDC34P49427 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.92□□□□□ -0.18
CDC34P49427 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CDC34P49427 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDC34P49427 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.91□□□□□ -0.18
CDC34P49427 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms