Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.94■■□□□ 1.1
RFC4P35249 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.94■■□□□ 1.1
RFC4P35249 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
RFC4P35249 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFC4P35249 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.93■■□□□ 1.1
RFC4P35249 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RFC4P35249 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
RFC4P35249 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.93■■□□□ 1.1
RFC4P35249 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.93■■□□□ 1.1
RFC4P35249 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.93■■□□□ 1.1
RFC4P35249 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.93■■□□□ 1.1
RFC4P35249 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.93■■□□□ 1.1
RFC4P35249 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.93■■□□□ 1.1
RFC4P35249 FAM86C2P-203ENST00000528684 1004 ntBASIC21.93■■□□□ 1.1
RFC4P35249 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.93■■□□□ 1.1
RFC4P35249 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.93■■□□□ 1.1
RFC4P35249 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.93■■□□□ 1.1
RFC4P35249 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.93■■□□□ 1.1
RFC4P35249 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.93■■□□□ 1.1
RFC4P35249 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.93■■□□□ 1.1
RFC4P35249 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RFC4P35249 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
RFC4P35249 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
RFC4P35249 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC4P35249 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC4P35249 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.92■■□□□ 1.1
RFC4P35249 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RFC4P35249 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC4P35249 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC4P35249 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RFC4P35249 AL355306.1-201ENST00000415580 579 ntBASIC21.92■■□□□ 1.1
RFC4P35249 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC4P35249 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.92■■□□□ 1.1
RFC4P35249 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC4P35249 SPDYE11-202ENST00000450699 704 ntBASIC21.92■■□□□ 1.1
RFC4P35249 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC4P35249 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.92■■□□□ 1.1
RFC4P35249 KRT8P48-201ENST00000515599 1220 ntBASIC21.92■■□□□ 1.1
RFC4P35249 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.92■■□□□ 1.1
RFC4P35249 SPDYE9P-201ENST00000570642 692 ntBASIC21.92■■□□□ 1.1
RFC4P35249 SPDYE10P-202ENST00000612005 668 ntBASIC21.92■■□□□ 1.1
RFC4P35249 SPDYE8P-202ENST00000612377 668 ntBASIC21.92■■□□□ 1.1
RFC4P35249 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC4P35249 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 AF228730.6-201ENST00000641497 218 ntBASIC21.92■■□□□ 1.1
RFC4P35249 AC084121.3-201ENST00000641716 218 ntBASIC21.92■■□□□ 1.1
RFC4P35249 AC105233.6-201ENST00000642093 218 ntBASIC21.92■■□□□ 1.1
RFC4P35249 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.92■■□□□ 1.1
RFC4P35249 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.92■■□□□ 1.1
RFC4P35249 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RFC4P35249 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RFC4P35249 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC21.92■■□□□ 1.1
RFC4P35249 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RFC4P35249 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.91■■□□□ 1.1
RFC4P35249 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.91■■□□□ 1.1
RFC4P35249 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
RFC4P35249 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RFC4P35249 AC015922.1-201ENST00000421102 1152 ntBASIC21.91■■□□□ 1.1
RFC4P35249 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms