Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC2P18074 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC2P18074 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.09■□□□□ 0.49
ERCC2P18074 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ERCC2P18074 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ERCC2P18074 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC2P18074 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC2P18074 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.09■□□□□ 0.49
ERCC2P18074 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ERCC2P18074 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC2P18074 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.09■□□□□ 0.49
ERCC2P18074 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ERCC2P18074 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC2P18074 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC2P18074 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.08■□□□□ 0.49
ERCC2P18074 AL353593.2-201ENST00000602529 1483 ntBASIC18.08■□□□□ 0.49
ERCC2P18074 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC2P18074 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC2P18074 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC2P18074 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC2P18074 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ERCC2P18074 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ERCC2P18074 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC2P18074 NUS1P1-201ENST00000446295 882 ntBASIC18.08■□□□□ 0.48
ERCC2P18074 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC2P18074 FOSL1P1-201ENST00000511041 816 ntBASIC18.08■□□□□ 0.48
ERCC2P18074 AC111152.3-201ENST00000569699 673 ntBASIC18.08■□□□□ 0.48
ERCC2P18074 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC2P18074 MIR5100-201ENST00000579544 119 ntBASIC18.08■□□□□ 0.48
ERCC2P18074 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.08■□□□□ 0.48
ERCC2P18074 AD001527.2-201ENST00000622994 785 ntBASIC18.08■□□□□ 0.48
ERCC2P18074 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ERCC2P18074 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ERCC2P18074 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ERCC2P18074 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ERCC2P18074 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ERCC2P18074 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ERCC2P18074 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ERCC2P18074 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.08■□□□□ 0.48
ERCC2P18074 CROCCP2-202ENST00000412962 2773 ntBASIC18.08■□□□□ 0.48
ERCC2P18074 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ERCC2P18074 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ERCC2P18074 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ERCC2P18074 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ERCC2P18074 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 MYCLP1-201ENST00000372451 1075 ntBASIC18.07■□□□□ 0.48
ERCC2P18074 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.07■□□□□ 0.48
ERCC2P18074 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
ERCC2P18074 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.07■□□□□ 0.48
ERCC2P18074 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.07■□□□□ 0.48
ERCC2P18074 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.07■□□□□ 0.48
ERCC2P18074 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ERCC2P18074 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ERCC2P18074 AL645608.8-201ENST00000606034 2086 ntBASIC18.07■□□□□ 0.48
ERCC2P18074 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ERCC2P18074 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ERCC2P18074 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC2P18074 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.06■□□□□ 0.48
ERCC2P18074 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms