Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COX4I1P13073 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
COX4I1P13073 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I1P13073 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I1P13073 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I1P13073 LINC02012-201ENST00000608206 1725 ntBASIC16.97■□□□□ 0.31
COX4I1P13073 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.97■□□□□ 0.31
COX4I1P13073 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 AC128676.1-201ENST00000454392 318 ntBASIC16.97■□□□□ 0.31
COX4I1P13073 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
COX4I1P13073 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 AC026691.1-201ENST00000602502 2017 ntBASIC16.97■□□□□ 0.31
COX4I1P13073 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.97■□□□□ 0.31
COX4I1P13073 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.97■□□□□ 0.31
COX4I1P13073 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
COX4I1P13073 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COX4I1P13073 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.97■□□□□ 0.31
COX4I1P13073 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.96■□□□□ 0.31
COX4I1P13073 AC011270.2-201ENST00000624293 2550 ntBASIC16.96■□□□□ 0.31
COX4I1P13073 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.96■□□□□ 0.31
COX4I1P13073 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
COX4I1P13073 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.96■□□□□ 0.31
COX4I1P13073 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
COX4I1P13073 RNF216P1-203ENST00000404404 2427 ntBASIC16.96■□□□□ 0.31
COX4I1P13073 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.96■□□□□ 0.31
COX4I1P13073 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.96■□□□□ 0.31
COX4I1P13073 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.96■□□□□ 0.31
COX4I1P13073 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.96■□□□□ 0.31
COX4I1P13073 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.96■□□□□ 0.31
COX4I1P13073 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.96■□□□□ 0.31
COX4I1P13073 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.96■□□□□ 0.31
COX4I1P13073 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.96■□□□□ 0.31
COX4I1P13073 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.96■□□□□ 0.31
COX4I1P13073 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.96■□□□□ 0.31
COX4I1P13073 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COX4I1P13073 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COX4I1P13073 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COX4I1P13073 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.96■□□□□ 0.3
COX4I1P13073 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COX4I1P13073 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COX4I1P13073 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
COX4I1P13073 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COX4I1P13073 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
COX4I1P13073 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.95■□□□□ 0.3
COX4I1P13073 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.95■□□□□ 0.3
COX4I1P13073 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.95■□□□□ 0.3
COX4I1P13073 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 AL391005.1-201ENST00000623953 2435 ntBASIC16.95■□□□□ 0.3
COX4I1P13073 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.95■□□□□ 0.3
COX4I1P13073 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COX4I1P13073 AC005104.2-201ENST00000427818 678 ntBASIC16.95■□□□□ 0.3
COX4I1P13073 SLC25A1P2-201ENST00000430693 912 ntBASIC16.95■□□□□ 0.3
COX4I1P13073 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COX4I1P13073 SEC1P-202ENST00000473944 940 ntBASIC16.95■□□□□ 0.3
COX4I1P13073 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.95■□□□□ 0.3
COX4I1P13073 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COX4I1P13073 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.95■□□□□ 0.3
COX4I1P13073 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.95■□□□□ 0.3
COX4I1P13073 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
COX4I1P13073 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COX4I1P13073 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms