Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 MRPL3P1-201ENST00000400109 1033 ntBASIC20.66■□□□□ 0.9
TOP1P11387 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.66■□□□□ 0.9
TOP1P11387 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.66■□□□□ 0.9
TOP1P11387 FAM197Y8-203ENST00000450145 560 ntBASIC20.66■□□□□ 0.9
TOP1P11387 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.66■□□□□ 0.9
TOP1P11387 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.66■□□□□ 0.9
TOP1P11387 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.66■□□□□ 0.9
TOP1P11387 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.66■□□□□ 0.9
TOP1P11387 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.66■□□□□ 0.9
TOP1P11387 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TOP1P11387 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TOP1P11387 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.66■□□□□ 0.9
TOP1P11387 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TOP1P11387 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.65■□□□□ 0.9
TOP1P11387 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.65■□□□□ 0.9
TOP1P11387 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.65■□□□□ 0.9
TOP1P11387 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TOP1P11387 AL049757.1-201ENST00000616842 1596 ntBASIC20.65■□□□□ 0.9
TOP1P11387 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.65■□□□□ 0.9
TOP1P11387 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.65■□□□□ 0.9
TOP1P11387 SCARNA2-201ENST00000458748 420 ntBASIC20.65■□□□□ 0.9
TOP1P11387 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 AL662844.1-201ENST00000546340 181 ntBASIC20.65■□□□□ 0.9
TOP1P11387 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.65■□□□□ 0.9
TOP1P11387 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.65■□□□□ 0.9
TOP1P11387 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.65■□□□□ 0.9
TOP1P11387 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TOP1P11387 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TOP1P11387 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.64■□□□□ 0.9
TOP1P11387 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.64■□□□□ 0.9
TOP1P11387 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TOP1P11387 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TOP1P11387 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.64■□□□□ 0.89
TOP1P11387 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TOP1P11387 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.64■□□□□ 0.89
TOP1P11387 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TOP1P11387 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.64■□□□□ 0.89
TOP1P11387 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TOP1P11387 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.64■□□□□ 0.89
TOP1P11387 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.64■□□□□ 0.89
TOP1P11387 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TOP1P11387 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TOP1P11387 AC019129.2-201ENST00000609837 1235 ntBASIC20.64■□□□□ 0.89
TOP1P11387 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.64■□□□□ 0.89
TOP1P11387 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TOP1P11387 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.64■□□□□ 0.89
TOP1P11387 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TOP1P11387 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TOP1P11387 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TOP1P11387 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TOP1P11387 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TOP1P11387 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
TOP1P11387 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TOP1P11387 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.64■□□□□ 0.89
TOP1P11387 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TOP1P11387 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TOP1P11387 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 AL353593.2-201ENST00000602529 1483 ntBASIC20.63■□□□□ 0.89
TOP1P11387 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 AL356309.3-201ENST00000624132 1934 ntBASIC20.63■□□□□ 0.89
TOP1P11387 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.63■□□□□ 0.89
TOP1P11387 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TOP1P11387 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TOP1P11387 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.63■□□□□ 0.89
TOP1P11387 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms